Package: quadcleanR 1.1.1.9000
quadcleanR: Cleanup and Visualization of Quadrat Data
A tool that can be customized to aid in the clean up of ecological data collected using quadrats and can crop quadrats to ensure comparability between quadrats collected under different methodologies.
Authors:
quadcleanR_1.1.1.9000.tar.gz
quadcleanR_1.1.1.9000.zip(r-4.5)quadcleanR_1.1.1.9000.zip(r-4.4)quadcleanR_1.1.1.9000.zip(r-4.3)
quadcleanR_1.1.1.9000.tgz(r-4.5-any)quadcleanR_1.1.1.9000.tgz(r-4.4-any)quadcleanR_1.1.1.9000.tgz(r-4.3-any)
quadcleanR_1.1.1.9000.tar.gz(r-4.5-noble)quadcleanR_1.1.1.9000.tar.gz(r-4.4-noble)
quadcleanR_1.1.1.9000.tgz(r-4.4-emscripten)quadcleanR_1.1.1.9000.tgz(r-4.3-emscripten)
quadcleanR.pdf |quadcleanR.html✨
quadcleanR/json (API)
NEWS
| # Install 'quadcleanR' in R: |
| install.packages('quadcleanR', repos = c('https://dominiquemaucieri.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/dominiquemaucieri/quadcleanr/issues
Pkgdown site:https://dominiquemaucieri.com
- coral_labelset - Labelset for Corals
- corals - Simple Coral Quadrat Data
- environmental_data - Sample Environmental Data for Cleaning Vignettes
- final_cleaned - Final cleaned quadrat data
- softcoral_LQuads - Sample Quadrat Data
- softcoral_SQuads - Sample Quadrat Data
- softcoral_annotations - Sample Annotation Data for Cropping Vignette
Last updated 2 years agofrom:ce61106fb0. Checks:9 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Mar 23 2025 |
| R-4.5-win | OK | Mar 23 2025 |
| R-4.5-mac | OK | Mar 23 2025 |
| R-4.5-linux | OK | Mar 23 2025 |
| R-4.4-win | OK | Mar 23 2025 |
| R-4.4-mac | OK | Mar 23 2025 |
| R-4.4-linux | OK | Mar 23 2025 |
| R-4.3-win | OK | Mar 23 2025 |
| R-4.3-mac | OK | Mar 23 2025 |
Exports:%>%add_datacategorizechange_nameschange_valuescover_calccrop_areakeep_rmrm_chrsample_sizesum_colsusable_obsvisualize_app
Dependencies:magrittr
Cleaning and Cropping Quadrat Data from CoralNet
Rendered fromcleaning_cropping_coral.Rmdusingknitr::rmarkdownon Mar 23 2025.Last update: 2022-09-02
Started: 2022-08-31
Cleaning Quadrat Data from CoralNet
Rendered fromcleaning_coral.Rmdusingknitr::rmarkdownon Mar 23 2025.Last update: 2022-09-02
Started: 2022-08-31
Simple Examples of Functions
Rendered fromfunction_examples.Rmdusingknitr::rmarkdownon Mar 23 2025.Last update: 2022-10-13
Started: 2022-08-31
Why to Crop Quadrats by Area
Rendered fromcropping.Rmdusingknitr::rmarkdownon Mar 23 2025.Last update: 2022-04-18
Started: 2022-02-19
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Add data to existing data frame. | add_data |
| Categorize data based on contents of a column | categorize |
| Change names of columns | change_names |
| Change values within a column | change_values |
| Labelset for Corals | coral_labelset |
| Simple Coral Quadrat Data | corals |
| Calculate species cover | cover_calc |
| Crop quadrats based on area | crop_area |
| Sample Environmental Data for Cleaning Vignettes | environmental_data |
| Final cleaned quadrat data | final_cleaned |
| Keep or remove rows and columns from data frame | keep_rm |
| Remove characters from data frame | rm_chr |
| Calculate sample sizes | sample_size |
| Sample Annotation Data for Cropping Vignette | softcoral_annotations |
| Sample Quadrat Data (1m by 1m) | softcoral_LQuads |
| Sample Quadrat Data (0.6m by 0.9m) | softcoral_SQuads |
| Sum columns based on matching names | sum_cols |
| Extract usable observations | usable_obs |
| Visualize cleaned data | visualize_app |
